From The College of Agriculture and Life Sciences At Cornell University Via “The Chronicle”: “Microbes key to sequestering carbon in soil”
From The College of Agriculture and Life Sciences
At
Via
5.24.23
Krishna Ramanujan | Cornell Chronicle
ksr32@cornell.edu
Microbes are by far the most important factor in determining how much carbon is stored in the soil, according to a new study with implications for mitigating climate change and improving soil health for agriculture and food production.
The research is the first to measure the relative importance of microbial processes in the soil carbon cycle. The study’s authors found that the role microbes play in storing carbon in the soil is at least four times more important than any other process, including decomposition of biomatter.
That’s important information: Earth’s soils hold three times more carbon than the atmosphere, creating a vital carbon sink in the fight against climate change.
The study, published May 24 in Nature [below], describes a novel approach to better understanding soil carbon dynamics by combining a microbial computer model with data assimilation and machine learning, to analyze big data related to the carbon cycle.
The method measured microbial carbon use efficiency which tells how much carbon was used by microbes for growth versus how much was used for metabolism. When used for growth, carbon becomes sequestered by microbes in cells and ultimately in the soil, and when used for metabolism, carbon is released as a side product in the air as carbon dioxide, where it acts as a greenhouse gas. Ultimately, growth of microbes is more important than metabolism in determining how much carbon is stored in the soil.
“This work reveals that microbial carbon use efficiency is more important than any other factor in determining soil carbon storage,” said Yiqi Luo, the Liberty Hyde Bailey Professor in the School of Integrative Plant Science in the College of Agriculture and Life Sciences, and the paper’s senior author.
The new insights point agricultural researchers toward studying farm management practices that may influence microbial carbon use efficiency to improve soil health, which also helps ensure greater food security. Future studies may investigate steps to increase overall soil carbon sequestration by microbes. Researchers may also study how different types of microbes and substrates (such as those high in sugars) may influence soil carbon storage.
Soil carbon dynamics have been studied for the last two centuries, but those studies were mainly concerned with how much carbon gets into the soil from leaf litter and roots, and how much is lost to the air in the form of CO2 when organic matter decomposes.
“But we are the first group that can evaluate the relative importance of microbial processes versus other processes,” Luo said.
In an example of cutting-edge digital agriculture, Luo and colleagues made a breakthrough and developed a method to integrate big data into an earth system computer model by using data assimilation and machine learning.
The model revealed that overall carbon use efficiency of microbe colonies was at least four times as important as any of the other components that were evaluated, including decomposition and carbon inputs.
The new process-based model, machine learning approach, which made this result possible for the first time, opens the possibility for applying the method to analyze other types of big data sets.
Feng Tao, a researcher at Tsinghua University, Beijing, is the paper’s first author. Xiaomeng Huang, a professor at Tsinghua University, is a corresponding author, along with Luo. Benjamin Houlton, the Ronald P. Lynch Dean of CALS and professor in the departments of Ecology and Evolutionary Biology and of Global Development; and Johannes Lehmann, the Liberty Hyde Bailey Professor in the Soil and Crop Sciences Section of the School of Integrative Plant Science in CALS, are both co-authors.
The study was funded by the National Science Foundation, the National Key Research and Development Program of China and the National Natural Science Foundation of China, among others.
Fig. 1: Two contrasting pathways in determining the relationship between microbial CUE and SOC storage.
a) The first pathway indicates that a high CUE favours the accumulation of SOC storage through increased microbial biomass and by-products. b) The second pathway emphasizes that a high CUE stimulates SOC losses via increased microbial biomass and subsequent extracellular enzyme production that enhances SOC decomposition.
Fig. 2: CUE–SOC relationship.
a)b) The CUE–SOC relationship that emerged from the meta-analysis of 132 measurements (a) and data assimilation using the microbial model with 57,267 globally distributed vertical SOC profiles (b). The black lines and statistics shown are the partial coefficients from mixed-effects model regressions (see Extended Data Tables 1 and 2 for details).
More instructive images are available in the science paper.
See the full article here .
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The New York State SUNY-College of Agriculture and Life Sciences at Cornell University is a statutory college and one of the four New York State contract colleges on the Cornell University campus in Ithaca, New York. With enrollment of approximately 3,100 undergraduate and 1,000 graduate students, CALS is the third-largest college of its kind in the United States and the second-largest undergraduate college on the Cornell campus.
Established as a Land-grant college, CALS administrates New York’s cooperative extension program jointly with the College of Human Ecology. CALS runs the New York State Agricultural Experiment Station in Geneva, New York, and the Cornell University Agricultural Experiment Station, as well as other research facilities in New York.
In 2007-08, CALS total budget (excluding the Geneva Station) is $283 million, with $96 million coming from tuition and $52 million coming from state appropriations. The Geneva Station budget was an additional $25 million.
Academic programs
CALS offers more than 20 majors, each with a focus on Life Sciences, Applied Social Sciences, Environmental Sciences and Agriculture and Food. CALS undergraduate programs lead to a Bachelor of Science degree in one of 23 different majors. The Applied Economics and Management program, for example, was ranked 3rd nationally in BusinessWeek’s Best Undergraduate Business Programs, 2012, edition. CALS also offers graduate degrees in various fields of study, including the M.A.T., M.L.A., M.P.S., M.S., and Ph.D.
Cornell’s College of Agriculture and Life Sciences is the most renowned institution in its field. In 2019, it is ranked 1st in the “Food and Nutrition” and “Agricultural Sciences” sectors of Niche.com
With an admission rate of 11.5% for the fall of 2018, admission into the college is extremely competitive and in the middle relative to the other colleges at Cornell.
Once called “the first American university” by educational historian Frederick Rudolph, Cornell University represents a distinctive mix of eminent scholarship and democratic ideals. Adding practical subjects to the classics and admitting qualified students regardless of nationality, race, social circumstance, gender, or religion was quite a departure when Cornell was founded in 1865.
Today’s Cornell reflects this heritage of egalitarian excellence. It is home to the nation’s first colleges devoted to hotel administration, industrial and labor relations, and veterinary medicine. Both a private university and the land-grant institution of New York State, Cornell University is the most educationally diverse member of the Ivy League.
On the Ithaca campus alone nearly 20,000 students representing every state and 120 countries choose from among 4,000 courses in 11 undergraduate, graduate, and professional schools. Many undergraduates participate in a wide range of interdisciplinary programs, play meaningful roles in original research, and study in Cornell programs in Washington, New York City, and the world over.
Cornell University is a private, statutory, Ivy League and land-grant research university in Ithaca, New York. Founded in 1865 by Ezra Cornell and Andrew Dickson White, the university was intended to teach and make contributions in all fields of knowledge—from the classics to the sciences, and from the theoretical to the applied. These ideals, unconventional for the time, are captured in Cornell’s founding principle, a popular 1868 quotation from founder Ezra Cornell: “I would found an institution where any person can find instruction in any study.”
The university is broadly organized into seven undergraduate colleges and seven graduate divisions at its main Ithaca campus, with each college and division defining its specific admission standards and academic programs in near autonomy. The university also administers two satellite medical campuses, one in New York City and one in Education City, Qatar, and The Jacobs Technion-Cornell Institute in New York City, a graduate program that incorporates technology, business, and creative thinking. The program moved from Google’s Chelsea Building in New York City to its permanent campus on Roosevelt Island in September 2017.
Cornell is one of the few private land grant universities in the United States. Of its seven undergraduate colleges, three are state-supported statutory or contract colleges through The State University of New York (SUNY) system, including its Agricultural and Human Ecology colleges as well as its Industrial Labor Relations school. Of Cornell’s graduate schools, only the veterinary college is state-supported. As a land grant college, Cornell operates a cooperative extension outreach program in every county of New York and receives annual funding from the State of New York for certain educational missions. The Cornell University Ithaca Campus comprises 745 acres, but is much larger when the Cornell Botanic Gardens (more than 4,300 acres) and the numerous university-owned lands in New York City are considered.
Alumni and affiliates of Cornell have reached many notable and influential positions in politics, media, and science. As of January 2021, 61 Nobel laureates, four Turing Award winners and one Fields Medalist have been affiliated with Cornell. Cornell counts more than 250,000 living alumni, and its former and present faculty and alumni include 34 Marshall Scholars, 33 Rhodes Scholars, 29 Truman Scholars, 7 Gates Scholars, 55 Olympic Medalists, 10 current Fortune 500 CEOs, and 35 billionaire alumni. Since its founding, Cornell has been a co-educational, non-sectarian institution where admission has not been restricted by religion or race. The student body consists of more than 15,000 undergraduate and 9,000 graduate students from all 50 American states and 119 countries.
History
Cornell University was founded on April 27, 1865; the New York State (NYS) Senate authorized the university as the state’s land grant institution. Senator Ezra Cornell offered his farm in Ithaca, New York, as a site and $500,000 of his personal fortune as an initial endowment. Fellow senator and educator Andrew Dickson White agreed to be the first president. During the next three years, White oversaw the construction of the first two buildings and traveled to attract students and faculty. The university was inaugurated on October 7, 1868, and 412 men were enrolled the next day.
Cornell developed as a technologically innovative institution, applying its research to its own campus and to outreach efforts. For example, in 1883 it was one of the first university campuses to use electricity from a water-powered dynamo to light the grounds. Since 1894, Cornell has included colleges that are state funded and fulfill statutory requirements; it has also administered research and extension activities that have been jointly funded by state and federal matching programs.
Cornell has had active alumni since its earliest classes. It was one of the first universities to include alumni-elected representatives on its Board of Trustees. Cornell was also among the Ivies that had heightened student activism during the 1960s related to cultural issues; civil rights; and opposition to the Vietnam War, with protests and occupations resulting in the resignation of Cornell’s president and the restructuring of university governance. Today the university has more than 4,000 courses. Cornell is also known for the Residential Club Fire of 1967, a fire in the Residential Club building that killed eight students and one professor.
Since 2000, Cornell has been expanding its international programs. In 2004, the university opened the Weill Cornell Medical College in Qatar. It has partnerships with institutions in India, Singapore, and the People’s Republic of China. Former president Jeffrey S. Lehman described the university, with its high international profile, a “transnational university”. On March 9, 2004, Cornell and Stanford University laid the cornerstone for a new ‘Bridging the Rift Center’ to be built and jointly operated for education on the Israel–Jordan border.
Research
Cornell, a research university, is ranked fourth in the world in producing the largest number of graduates who go on to pursue PhDs in engineering or the natural sciences at American institutions, and fifth in the world in producing graduates who pursue PhDs at American institutions in any field. Research is a central element of the university’s mission; in 2009 Cornell spent $671 million on science and engineering research and development, the 16th highest in the United States.
Cornell is a member of the Association of American Universities and is classified among “R1: Doctoral Universities – Very high research activity”.
For the 2016–17 fiscal year, the university spent $984.5 million on research. Federal sources constitute the largest source of research funding, with total federal investment of $438.2 million. The agencies contributing the largest share of that investment are The Department of Health and Human Services and the National Science Foundation , accounting for 49.6% and 24.4% of all federal investment, respectively. Cornell was on the top-ten list of U.S. universities receiving the most patents in 2003, and was one of the nation’s top five institutions in forming start-up companies. In 2004–05, Cornell received 200 invention disclosures; filed 203 U.S. patent applications; completed 77 commercial license agreements; and distributed royalties of more than $4.1 million to Cornell units and inventors.
Since 1962, Cornell has been involved in unmanned missions to Mars. In the 21st century, Cornell had a hand in the Mars Exploration Rover Mission. Cornell’s Steve Squyres, Principal Investigator for the Athena Science Payload, led the selection of the landing zones and requested data collection features for the Spirit and Opportunity rovers. NASA-JPL/Caltech engineers took those requests and designed the rovers to meet them. The rovers, both of which have operated long past their original life expectancies, are responsible for the discoveries that were awarded 2004 Breakthrough of the Year honors by Science. Control of the Mars rovers has shifted between National Aeronautics and Space Administration’s Jet Propulsion Laboratory at Caltech and Cornell’s Space Sciences Building.
Further, Cornell researchers discovered the rings around the planet Uranus, and Cornell built and operated the telescope at Arecibo Observatory located in Arecibo, Puerto Rico(US) until 2011, when they transferred the operations to SRI International, the Universities Space Research Association and the Metropolitan University of Puerto Rico [Universidad Metropolitana de Puerto Rico].
The Automotive Crash Injury Research Project was begun in 1952. It pioneered the use of crash testing, originally using corpses rather than dummies. The project discovered that improved door locks; energy-absorbing steering wheels; padded dashboards; and seat belts could prevent an extraordinary percentage of injuries.
In the early 1980s, Cornell deployed the first IBM 3090-400VF and coupled two IBM 3090-600E systems to investigate coarse-grained parallel computing. In 1984, the National Science Foundation began work on establishing five new supercomputer centers, including the Cornell Center for Advanced Computing, to provide high-speed computing resources for research within the United States. As a National Science Foundation center, Cornell deployed the first IBM Scalable Parallel supercomputer.
In the 1990s, Cornell developed scheduling software and deployed the first supercomputer built by Dell. Most recently, Cornell deployed Red Cloud, one of the first cloud computing services designed specifically for research. Today, the center is a partner on the National Science Foundation XSEDE-Extreme Science Engineering Discovery Environment supercomputing program, providing coordination for XSEDE architecture and design, systems reliability testing, and online training using the Cornell Virtual Workshop learning platform.
Cornell scientists have researched the fundamental particles of nature for more than 70 years. Cornell physicists, such as Hans Bethe, contributed not only to the foundations of nuclear physics but also participated in the Manhattan Project. In the 1930s, Cornell built the second cyclotron in the United States. In the 1950s, Cornell physicists became the first to study synchrotron radiation.
During the 1990s, the Cornell Electron Storage Ring, located beneath Alumni Field, was the world’s highest-luminosity electron-positron collider. After building the synchrotron at Cornell, Robert R. Wilson took a leave of absence to become the founding director of DOE’s Fermi National Accelerator Laboratory, which involved designing and building the largest accelerator in the United States.
Cornell’s accelerator and high-energy physics groups are involved in the design of the proposed ILC-International Linear Collider (JP) and plan to participate in its construction and operation. The International Linear Collider (JP), to be completed in the late 2010s, will complement the The European Organization for Nuclear Research [La Organización Europea para la Investigación Nuclear][Organisation européenne pour la recherche nucléaire] [Europäische Organisation für Kernforschung](CH)[CERN] Large Hadron Collider(CH) and shed light on questions such as the identity of dark matter and the existence of extra dimensions.
As part of its research work, Cornell has established several research collaborations with universities around the globe. For example, a partnership with the University of Sussex(UK) (including the Institute of Development Studies at Sussex) allows research and teaching collaboration between the two institutions.
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